Fix --taxon-list being broken multi-threaded in prefilter and ungappe… #76
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| name: Build macOS ARM64 | |
| on: | |
| push: | |
| branches: | |
| - master | |
| jobs: | |
| build: | |
| runs-on: [self-hosted, macOS, ARM64] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| with: | |
| submodules: true | |
| - name: Build | |
| run: | | |
| mkdir -p build | |
| cd build | |
| LIBOMP=$(brew --prefix libomp) | |
| cmake \ | |
| -DCMAKE_BUILD_TYPE=Release \ | |
| -DOpenMP_C_FLAGS="-Xpreprocessor -fopenmp -I${LIBOMP}/include" \ | |
| -DOpenMP_C_LIB_NAMES=omp \ | |
| -DOpenMP_CXX_FLAGS="-Xpreprocessor -fopenmp -I${LIBOMP}/include" \ | |
| -DOpenMP_CXX_LIB_NAMES=omp \ | |
| -DOpenMP_omp_LIBRARY=${LIBOMP}/lib/libomp.a \ | |
| .. | |
| make -j$(sysctl -n hw.ncpu) | |
| - name: Test | |
| run: ./util/regression/run_regression.sh ./build/src/mmseqs SCRATCH |