Skip to content

Commit

Permalink
Built site for gh-pages
Browse files Browse the repository at this point in the history
  • Loading branch information
Quarto GHA Workflow Runner committed Aug 28, 2024
1 parent b5e0497 commit 7b1c481
Show file tree
Hide file tree
Showing 17 changed files with 43 additions and 61 deletions.
2 changes: 1 addition & 1 deletion .nojekyll
Original file line number Diff line number Diff line change
@@ -1 +1 @@
94fe518d
4fd5ff4a
4 changes: 2 additions & 2 deletions admin.html
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="dcterms.date" content="2024-08-21">
<meta name="dcterms.date" content="2024-08-28">

<title>Administration – ukbAid</title>
<style>
Expand Down Expand Up @@ -232,7 +232,7 @@ <h1 class="title">Administration</h1>
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">August 21, 2024</p>
<p class="date">August 28, 2024</p>
</div>
</div>

Expand Down
4 changes: 2 additions & 2 deletions code-review.html
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="dcterms.date" content="2024-08-21">
<meta name="dcterms.date" content="2024-08-28">

<title>Code review – ukbAid</title>
<style>
Expand Down Expand Up @@ -188,7 +188,7 @@ <h1 class="title">Code review</h1>
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">August 21, 2024</p>
<p class="date">August 28, 2024</p>
</div>
</div>

Expand Down
4 changes: 2 additions & 2 deletions design.html
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="dcterms.date" content="2024-08-21">
<meta name="dcterms.date" content="2024-08-28">

<title>Design – ukbAid</title>
<style>
Expand Down Expand Up @@ -229,7 +229,7 @@ <h1 class="title">Design</h1>
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">August 21, 2024</p>
<p class="date">August 28, 2024</p>
</div>
</div>

Expand Down
4 changes: 2 additions & 2 deletions faq.html
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="dcterms.date" content="2024-08-21">
<meta name="dcterms.date" content="2024-08-28">

<title>Frequently asked questions – ukbAid</title>
<style>
Expand Down Expand Up @@ -188,7 +188,7 @@ <h1 class="title">Frequently asked questions</h1>
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">August 21, 2024</p>
<p class="date">August 28, 2024</p>
</div>
</div>

Expand Down
4 changes: 2 additions & 2 deletions governance.html
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="dcterms.date" content="2024-08-21">
<meta name="dcterms.date" content="2024-08-28">

<title>Governance – ukbAid</title>
<style>
Expand Down Expand Up @@ -188,7 +188,7 @@ <h1 class="title">Governance</h1>
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">August 21, 2024</p>
<p class="date">August 28, 2024</p>
</div>
</div>

Expand Down
4 changes: 2 additions & 2 deletions important-notes.html
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="dcterms.date" content="2024-08-21">
<meta name="dcterms.date" content="2024-08-28">

<title>Important notes on using GitHub – ukbAid</title>
<style>
Expand Down Expand Up @@ -194,7 +194,7 @@ <h1 class="title">Important notes on using GitHub</h1>
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">August 21, 2024</p>
<p class="date">August 28, 2024</p>
</div>
</div>

Expand Down
4 changes: 2 additions & 2 deletions index.html
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="dcterms.date" content="2024-08-21">
<meta name="dcterms.date" content="2024-08-28">

<title>Welcome! – ukbAid</title>
<style>
Expand Down Expand Up @@ -203,7 +203,7 @@ <h1 class="title">Welcome!</h1>
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">August 21, 2024</p>
<p class="date">August 28, 2024</p>
</div>
</div>

Expand Down
4 changes: 2 additions & 2 deletions initial-setup.html
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="dcterms.date" content="2024-08-21">
<meta name="dcterms.date" content="2024-08-28">

<title>Initial setup after acceptance – ukbAid</title>
<style>
Expand Down Expand Up @@ -232,7 +232,7 @@ <h1 class="title">Initial setup after acceptance</h1>
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">August 21, 2024</p>
<p class="date">August 28, 2024</p>
</div>
</div>

Expand Down
2 changes: 1 addition & 1 deletion pkg/pkgdown.yml
Original file line number Diff line number Diff line change
Expand Up @@ -15,7 +15,7 @@ articles:
request-access: request-access.html
using-rap: using-rap.html
workflow: workflow.html
last_built: 2024-08-21T16:32Z
last_built: 2024-08-28T18:58Z
urls:
reference: https://steno-aarhus.github.io/ukbAid/reference
article: https://steno-aarhus.github.io/ukbAid/articles
4 changes: 2 additions & 2 deletions project-description.html
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="dcterms.date" content="2024-08-21">
<meta name="dcterms.date" content="2024-08-28">

<title>Project description – ukbAid</title>
<style>
Expand Down Expand Up @@ -201,7 +201,7 @@ <h1 class="title">Project description</h1>
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">August 21, 2024</p>
<p class="date">August 28, 2024</p>
</div>
</div>

Expand Down
17 changes: 3 additions & 14 deletions projects.html
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="dcterms.date" content="2024-08-21">
<meta name="dcterms.date" content="2024-08-28">

<title>Approved projects – ukbAid</title>
<style>
Expand Down Expand Up @@ -183,7 +183,6 @@ <h2 id="toc-title">On this page</h2>
<li><a href="#kimo-unraveling-the-relationship-between-kidney-function-and-cardiovascular-risk" id="toc-kimo-unraveling-the-relationship-between-kidney-function-and-cardiovascular-risk" class="nav-link" data-scroll-target="#kimo-unraveling-the-relationship-between-kidney-function-and-cardiovascular-risk">kimo: Unraveling the Relationship Between Kidney Function and Cardiovascular Risk</a></li>
<li><a href="#lebio-legume-consumption-and-hepatobiliary-biomarkers" id="toc-lebio-legume-consumption-and-hepatobiliary-biomarkers" class="nav-link" data-scroll-target="#lebio-legume-consumption-and-hepatobiliary-biomarkers">lebio: Legume consumption and hepatobiliary biomarkers</a></li>
<li><a href="#lega-legume-consumption-and-risk-of-gallbladder-disease" id="toc-lega-legume-consumption-and-risk-of-gallbladder-disease" class="nav-link" data-scroll-target="#lega-legume-consumption-and-risk-of-gallbladder-disease">lega: Legume consumption and risk of gallbladder disease</a></li>
<li><a href="#legliv-legume-consumption-and-risk-of-primary-liver-cancer" id="toc-legliv-legume-consumption-and-risk-of-primary-liver-cancer" class="nav-link" data-scroll-target="#legliv-legume-consumption-and-risk-of-primary-liver-cancer">legliv: Legume consumption and risk of primary liver cancer</a></li>
<li><a href="#leha-prospective-study-on-association-between-legume-consumption-and-risk-of-hepatic-and-biliary-disease-in-ukb" id="toc-leha-prospective-study-on-association-between-legume-consumption-and-risk-of-hepatic-and-biliary-disease-in-ukb" class="nav-link" data-scroll-target="#leha-prospective-study-on-association-between-legume-consumption-and-risk-of-hepatic-and-biliary-disease-in-ukb">leha: Prospective study on association between legume consumption and risk of hepatic and biliary disease in UKB</a></li>
<li><a href="#met-diet-dietary-patterns-metabolites-and-cardiometabolic-risk-factors" id="toc-met-diet-dietary-patterns-metabolites-and-cardiometabolic-risk-factors" class="nav-link" data-scroll-target="#met-diet-dietary-patterns-metabolites-and-cardiometabolic-risk-factors">met-diet: Dietary patterns, metabolites and cardiometabolic risk factors</a></li>
</ul>
Expand All @@ -205,7 +204,7 @@ <h1 class="title">Approved projects</h1>
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">August 21, 2024</p>
<p class="date">August 28, 2024</p>
</div>
</div>

Expand Down Expand Up @@ -247,6 +246,7 @@ <h2 class="anchored" data-anchor-id="crc-fs-replacing-animal-based-foods-with-pl
<ul>
<li>Lead author: Niels Bock, Research student at Aarhus University</li>
<li>GitHub repository: <a href="https://github.com/steno-aarhus/crc-fs">github.com/steno-aarhus/crc-fs</a></li>
<li>Protocol: <a href="https://doi.org/10.5281/zenodo.13387535">10.5281/zenodo.13387535</a></li>
</ul>
</section>
<section id="dash-hf-dash-diet-and-heart-failure" class="level2">
Expand Down Expand Up @@ -289,17 +289,6 @@ <h2 class="anchored" data-anchor-id="lega-legume-consumption-and-risk-of-gallbla
<li>GitHub repository: <a href="https://github.com/steno-aarhus/lega">github.com/steno-aarhus/lega</a></li>
</ul>
</section>
<section id="legliv-legume-consumption-and-risk-of-primary-liver-cancer" class="level2">
<h2 class="anchored" data-anchor-id="legliv-legume-consumption-and-risk-of-primary-liver-cancer">legliv: Legume consumption and risk of primary liver cancer</h2>
<p>Non-alcoholic fatty liver disease (NAFLD) may be considered the hepatic manifestation of metabolic syndrome. NAFLD-related primary liver cancer is a growing concern, and preventive interventions are critical. We will statistically model replacement of red meat consumption with legumes in relation to incident primary liver cancer and assess whether the association is mediated through NAFLD.</p>
<ul>
<li>Lead author: Niels Bock, Research year student at Aarhus University</li>
<li>GitHub repository: <a href="https://github.com/steno-aarhus/legliv">github.com/steno-aarhus/legliv</a></li>
<li>Protocol: <a href="https://doi.org/10.5281/zenodo.11670569">10.5281/zenodo.11670569</a></li>
<li>Preprint: <a href="https://doi.org/10.5281/zenodo.12666778">10.5281/zenodo.12666778</a></li>
<li>Repo: <a href="https://doi.org/10.5281/zenodo.12702170">10.5281/zenodo.12702170</a></li>
</ul>
</section>
<section id="leha-prospective-study-on-association-between-legume-consumption-and-risk-of-hepatic-and-biliary-disease-in-ukb" class="level2">
<h2 class="anchored" data-anchor-id="leha-prospective-study-on-association-between-legume-consumption-and-risk-of-hepatic-and-biliary-disease-in-ukb">leha: Prospective study on association between legume consumption and risk of hepatic and biliary disease in UKB</h2>
<p>The primary objective of this study is to examine the potential connection between legume consumption and the risk of various hepato-biliary disorders, including non-alcoholic steatohepatitis (NASH), non-alcoholic fatty liver disease (NAFLD), cholelithiasis, cholecystitis, cholecystectomy, pancreatitis, and pancreatectomy. The investigation takes into account possible factors that could influence this association.The study focuses on a population comprising individuals enrolled in the UK Biobank (UKB) who did not exhibit hepato-biliary diseases at the baseline assessment. Eligible participants are those who have completed one or more 24-hour dietary recall surveys. The intervention or exposure of interest is the daily consumption of legumes in grams, specifically looking at scenarios where legumes replace meat in the diet. In essence, the study seeks to explore whether legume consumption, when considered against potential confounding variables, is associated with the occurrence of hepato-biliary disorders, offering insights into dietary factors that may impact liver and gallbladder health.</p>
Expand Down
4 changes: 2 additions & 2 deletions request-access.html
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="dcterms.date" content="2024-08-21">
<meta name="dcterms.date" content="2024-08-28">

<title>Requesting access to the UK Biobank through SDCA’s project – ukbAid</title>
<style>
Expand Down Expand Up @@ -195,7 +195,7 @@ <h1 class="title">Requesting access to the UK Biobank through SDCA’s project</
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">August 21, 2024</p>
<p class="date">August 28, 2024</p>
</div>
</div>

Expand Down
9 changes: 1 addition & 8 deletions search.json
Original file line number Diff line number Diff line change
Expand Up @@ -242,7 +242,7 @@
"href": "projects.html#crc-fs-replacing-animal-based-foods-with-plant-based-foods-and-risk-of-colorectal-cancer-in-uk-biobank-participants",
"title": "Approved projects",
"section": "crc-fs: Replacing animal-based foods with plant-based foods and risk of colorectal cancer in UK Biobank participants",
"text": "crc-fs: Replacing animal-based foods with plant-based foods and risk of colorectal cancer in UK Biobank participants\nReducing red and processed meat intake or adopting a plant-based diet may lower the risk of colorectal cancer. However, the effects of decreasing the consumption of one type of food while concomitantly increasing the intake of another on colorectal cancer risk are not well understood. Thus, this project aims to investigate the association of statistically modelled replacement of animal-based foods with a variety of plant-based foods and the risk of developing colorectal cancer.\n\nLead author: Niels Bock, Research student at Aarhus University\nGitHub repository: github.com/steno-aarhus/crc-fs"
"text": "crc-fs: Replacing animal-based foods with plant-based foods and risk of colorectal cancer in UK Biobank participants\nReducing red and processed meat intake or adopting a plant-based diet may lower the risk of colorectal cancer. However, the effects of decreasing the consumption of one type of food while concomitantly increasing the intake of another on colorectal cancer risk are not well understood. Thus, this project aims to investigate the association of statistically modelled replacement of animal-based foods with a variety of plant-based foods and the risk of developing colorectal cancer.\n\nLead author: Niels Bock, Research student at Aarhus University\nGitHub repository: github.com/steno-aarhus/crc-fs\nProtocol: 10.5281/zenodo.13387535"
},
{
"objectID": "projects.html#dash-hf-dash-diet-and-heart-failure",
Expand Down Expand Up @@ -279,13 +279,6 @@
"section": "lega: Legume consumption and risk of gallbladder disease",
"text": "lega: Legume consumption and risk of gallbladder disease\nHigher legume consumption is recommended as a meat substitute to increase healthiness and minimize the climate impact from humans diets. Legumes has in animal studies and a few human studies shown to increase gallstone formation through altering the lipid metabolism in the liver. A high consumption of legumes may thus be associated with an increased risk of gallstones, yet there exists very few studies investigating this in human populations, particularly due to low consumption of legumes in many countries. Aim: To investigate the association between substituting meat, poultry, and fish for legumes and the risk of developing gallstone diseases in a cohort with moderate to high legume consumption.\n\nLead author: Fie Langmann, PhD student at Aarhus University\nGitHub repository: github.com/steno-aarhus/lega"
},
{
"objectID": "projects.html#legliv-legume-consumption-and-risk-of-primary-liver-cancer",
"href": "projects.html#legliv-legume-consumption-and-risk-of-primary-liver-cancer",
"title": "Approved projects",
"section": "legliv: Legume consumption and risk of primary liver cancer",
"text": "legliv: Legume consumption and risk of primary liver cancer\nNon-alcoholic fatty liver disease (NAFLD) may be considered the hepatic manifestation of metabolic syndrome. NAFLD-related primary liver cancer is a growing concern, and preventive interventions are critical. We will statistically model replacement of red meat consumption with legumes in relation to incident primary liver cancer and assess whether the association is mediated through NAFLD.\n\nLead author: Niels Bock, Research year student at Aarhus University\nGitHub repository: github.com/steno-aarhus/legliv\nProtocol: 10.5281/zenodo.11670569\nPreprint: 10.5281/zenodo.12666778\nRepo: 10.5281/zenodo.12702170"
},
{
"objectID": "projects.html#leha-prospective-study-on-association-between-legume-consumption-and-risk-of-hepatic-and-biliary-disease-in-ukb",
"href": "projects.html#leha-prospective-study-on-association-between-legume-consumption-and-risk-of-hepatic-and-biliary-disease-in-ukb",
Expand Down
26 changes: 13 additions & 13 deletions sitemap.xml
Original file line number Diff line number Diff line change
Expand Up @@ -2,54 +2,54 @@
<urlset xmlns="http://www.sitemaps.org/schemas/sitemap/0.9">
<url>
<loc>https://steno-aarhus.github.io/ukbAid/index.html</loc>
<lastmod>2024-08-21T16:08:14.161Z</lastmod>
<lastmod>2024-08-28T18:56:46.023Z</lastmod>
</url>
<url>
<loc>https://steno-aarhus.github.io/ukbAid/code-review.html</loc>
<lastmod>2024-08-21T16:08:14.161Z</lastmod>
<lastmod>2024-08-28T18:56:46.023Z</lastmod>
</url>
<url>
<loc>https://steno-aarhus.github.io/ukbAid/using-rap.html</loc>
<lastmod>2024-08-21T16:08:14.161Z</lastmod>
<lastmod>2024-08-28T18:56:46.023Z</lastmod>
</url>
<url>
<loc>https://steno-aarhus.github.io/ukbAid/faq.html</loc>
<lastmod>2024-08-21T16:08:14.161Z</lastmod>
<lastmod>2024-08-28T18:56:46.023Z</lastmod>
</url>
<url>
<loc>https://steno-aarhus.github.io/ukbAid/initial-setup.html</loc>
<lastmod>2024-08-21T16:08:14.161Z</lastmod>
<lastmod>2024-08-28T18:56:46.023Z</lastmod>
</url>
<url>
<loc>https://steno-aarhus.github.io/ukbAid/governance.html</loc>
<lastmod>2024-08-21T16:08:14.161Z</lastmod>
<lastmod>2024-08-28T18:56:46.023Z</lastmod>
</url>
<url>
<loc>https://steno-aarhus.github.io/ukbAid/project-description.html</loc>
<lastmod>2024-08-21T16:08:14.161Z</lastmod>
<lastmod>2024-08-28T18:56:46.023Z</lastmod>
</url>
<url>
<loc>https://steno-aarhus.github.io/ukbAid/admin.html</loc>
<lastmod>2024-08-21T16:08:14.161Z</lastmod>
<lastmod>2024-08-28T18:56:46.023Z</lastmod>
</url>
<url>
<loc>https://steno-aarhus.github.io/ukbAid/projects.html</loc>
<lastmod>2024-08-21T16:08:14.161Z</lastmod>
<lastmod>2024-08-28T18:56:46.023Z</lastmod>
</url>
<url>
<loc>https://steno-aarhus.github.io/ukbAid/workflow.html</loc>
<lastmod>2024-08-21T16:08:14.161Z</lastmod>
<lastmod>2024-08-28T18:56:46.023Z</lastmod>
</url>
<url>
<loc>https://steno-aarhus.github.io/ukbAid/request-access.html</loc>
<lastmod>2024-08-21T16:08:14.161Z</lastmod>
<lastmod>2024-08-28T18:56:46.023Z</lastmod>
</url>
<url>
<loc>https://steno-aarhus.github.io/ukbAid/important-notes.html</loc>
<lastmod>2024-08-21T16:08:14.161Z</lastmod>
<lastmod>2024-08-28T18:56:46.023Z</lastmod>
</url>
<url>
<loc>https://steno-aarhus.github.io/ukbAid/design.html</loc>
<lastmod>2024-08-21T16:08:14.161Z</lastmod>
<lastmod>2024-08-28T18:56:46.023Z</lastmod>
</url>
</urlset>
4 changes: 2 additions & 2 deletions using-rap.html
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="dcterms.date" content="2024-08-21">
<meta name="dcterms.date" content="2024-08-28">

<title>Working in the Research Analysis Platform (RAP) – ukbAid</title>
<style>
Expand Down Expand Up @@ -229,7 +229,7 @@ <h1 class="title">Working in the Research Analysis Platform (RAP)</h1>
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">August 21, 2024</p>
<p class="date">August 28, 2024</p>
</div>
</div>

Expand Down
4 changes: 2 additions & 2 deletions workflow.html
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@

<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes">

<meta name="dcterms.date" content="2024-08-21">
<meta name="dcterms.date" content="2024-08-28">

<title>workflow – ukbAid</title>
<style>
Expand Down Expand Up @@ -194,7 +194,7 @@ <h1 class="title">workflow</h1>
<div>
<div class="quarto-title-meta-heading">Published</div>
<div class="quarto-title-meta-contents">
<p class="date">August 21, 2024</p>
<p class="date">August 28, 2024</p>
</div>
</div>

Expand Down

0 comments on commit 7b1c481

Please sign in to comment.