Merge branch 'develop' into elizabeth/refactor-skeletons-serialization #10
Workflow file for this run
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| # Run tests using built wheels. | |
| name: Build PyPI CI (no upload) | |
| # Run when changes to pip wheel | |
| on: | |
| push: | |
| paths: | |
| - "setup.py" | |
| - "requirements.txt" | |
| - "dev_requirements.txt" | |
| - "jupyter_requirements.txt" | |
| - "pypi_requirements.txt" | |
| - "environment_build.yml" | |
| - ".github/workflows/build_pypi_ci.yml" | |
| jobs: | |
| build: | |
| name: Build wheel (${{ matrix.os }}) | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-22.04"] | |
| # https://docs.github.com/en/actions/using-workflows/workflow-syntax-for-github-actions#jobsjob_idstrategymatrixinclude | |
| include: | |
| # Use this condarc as default | |
| - condarc: .conda/condarc.yaml | |
| - wheel_name: sleap-wheel-linux | |
| - pyver: "3.7" | |
| steps: | |
| # Setup | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup Miniconda | |
| uses: conda-incubator/[email protected] | |
| with: | |
| miniforge-version: latest | |
| condarc-file: ${{ matrix.condarc }} | |
| python-version: ${{ matrix.pyver }} | |
| environment-file: environment_build.yml | |
| activate-environment: sleap_ci | |
| conda-solver: "libmamba" | |
| - name: Print build environment info | |
| shell: bash -l {0} | |
| run: | | |
| which python | |
| conda list | |
| pip freeze | |
| # Build pip wheel | |
| - name: Build pip wheel | |
| shell: bash -l {0} | |
| run: | | |
| python setup.py bdist_wheel | |
| # Upload artifact "tests" can use it | |
| - name: Upload wheel artifact | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: ${{ matrix.wheel_name }} | |
| path: dist/*.whl | |
| retention-days: 1 | |
| tests: | |
| name: Run tests using wheel (${{ matrix.os }}) | |
| runs-on: ${{ matrix.os }} | |
| needs: build # Ensure the build job has completed before starting this job. | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: ["ubuntu-22.04", "windows-2022"] | |
| # os: ["ubuntu-22.04", "windows-2022", "macos-14"] # removing macos-14 for now since the setup-python action only support py>=3.10, which is breaking this CI. | |
| # https://docs.github.com/en/actions/using-workflows/workflow-syntax-for-github-actions#jobsjob_idstrategymatrixinclude | |
| include: | |
| # Default values | |
| - wheel_name: sleap-wheel-linux | |
| - venv_cmd: source venv/bin/activate | |
| - pip_cmd: | | |
| wheel_path=$(find dist -name "*.whl") | |
| echo $wheel_path | |
| pip install '$wheel_path'[dev] | |
| - test_args: pytest --durations=-1 tests/ | |
| - condarc: .conda/condarc.yaml | |
| - pyver: "3.7" | |
| # Use special condarc if macos | |
| - os: "macos-14" | |
| condarc: .conda_mac/condarc.yaml | |
| pyver: "3.10" | |
| # Ubuntu specific values | |
| - os: ubuntu-22.04 | |
| # Otherwise core dumped in github actions | |
| test_args: | | |
| sudo apt install xvfb libxkbcommon-x11-0 libxcb-icccm4 libxcb-image0 libxcb-keysyms1 libxcb-randr0 libxcb-render-util0 libxcb-xinerama0 libxcb-xfixes0 | |
| sudo Xvfb :1 -screen 0 1024x768x24 </dev/null & | |
| export DISPLAY=":1" | |
| pytest tests -k 'not exclude_from_linux_pip_test' | |
| # Windows specific values | |
| - os: windows-2022 | |
| venv_cmd: .\venv\Scripts\activate | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Setup Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: ${{ matrix.pyver }} | |
| # Download wheel | |
| - name: Download wheel artifact | |
| uses: actions/download-artifact@v4 | |
| id: download | |
| with: | |
| name: ${{ matrix.wheel_name }} | |
| path: dist | |
| - name: Create virtual environment | |
| run: python -m venv venv | |
| - name: Activate virtual environment | |
| run: ${{ matrix.venv_cmd }} | |
| - name: Install the built wheel (not Mac) | |
| if: runner.os != 'macOS' | |
| shell: bash -l {0} | |
| run: | | |
| wheel_path=$(find dist -name "*.whl") | |
| echo wheel_path | |
| pip install "$wheel_path"[dev] | |
| - name: Install the built wheel (Mac) | |
| if: runner.os == 'macOS' | |
| shell: bash -e {0} | |
| run: | | |
| wheel_path=$(find dist -name "*.whl") | |
| echo wheel_path | |
| pip install "$wheel_path"[dev] | |
| - name: Print test environment info | |
| shell: bash -l {0} | |
| run: | | |
| which python | |
| pip freeze | |
| # Install and test the wheel | |
| - name: Test the built wheel | |
| run: | | |
| ${{ matrix.test_args}} |