Fixed a bug in gtrack.import from bigwig

tanaylab · Jul 22, 2024 · 9514632 · 9514632
1 parent ffe7066
commit 9514632
Show file tree

Hide file tree

Showing 3 changed files with 6 additions and 2 deletions.
diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,7 +1,7 @@
 Type: Package
 Package: misha
 Title: Toolkit for Analysis of Genomic Data
-Version: 4.2.9
+Version: 4.2.10
 Authors@R: c(
     person("Misha", "Hoichman", , "[email protected]", role = "aut"),
     person("Aviezer", "Lifshitz", , "[email protected]", role = c("aut", "cre")),

diff --git a/NEWS.md b/NEWS.md
@@ -1,3 +1,7 @@
+# misha 4.2.10 
+
+* Fixed a bug in `gtrack.import` from bigwig.
+
 # misha 4.2.9
 
 * Fixed compilation issues in M1 Mac.

diff --git a/R/track.R b/R/track.R
@@ -550,7 +550,7 @@ gtrack.import <- function(track = NULL, description = NULL, file = NULL, binsize
 
                 file.noext <- basename(gsub("^(.+)\\.(.+)$", "\\1", file, perl = TRUE))
                 file.converted <- paste(tmp.dirname, "/", file.noext, ".wig", sep = "")
-                if (paste(system(get_bigWigToWig_bin(), file, file.converted))) {
+                if (system(paste(get_bigWigToWig_bin(), file, file.converted))) {
                     stop("Command failed", call. = FALSE)
                 }
                 file <- file.converted