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Automatic snapshot commit from seacas at 94e88d4519 #13762

Merged
merged 2 commits into from
Jan 31, 2025
Merged

Automatic snapshot commit from seacas at 94e88d4519 #13762

merged 2 commits into from
Jan 31, 2025

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gsjaardema
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Origin repo remote tracking branch: 'origin/develop'
Origin repo remote repo URL: 'origin = https://github.com/sandialabs/seacas'
Git describe: i2024-11-15-47-gc376c98dfe

At commit:

commit 94e88d451990cea8ff5520c769e6d29e0fd7cb9d
Author: Greg Sjaardema [email protected]
Date: Tue Jan 28 15:58:59 2025 -0700
Summary: IOSS: cgns - minor tweak to decomposition algorithm to avoid 0 intervals

  • Several files -- remove trailing whitespace

  • Several -- Cleanups from compiler and static analyzer warnings

  • Exodiff -- Use Namelist as alias for std::vectorstd::string, Rename class ExoII_Read to Exo_Read

  • Aprepro -- better error detection/reporting. Support string+string for concatenation in addition to //

  • Aprepro -- add a format function to print variable using a specified output format.

  • Exodus -- clean up lots of trailing whitespace in tests

  • Exodus -- support additional compression algorithms

  • IOSS -- New change-set (dynamic topology) code [Tolu primarily]

  • IOSS -- cgns decomp - fix bug giving 0 intervals on a zone

  • nem_slice -- Use enum class and rename some enums

  • Compression -- add zstd, bz2, and lossy quantize compression to several apps

@trilinos/seacas

Motivation

Primary reasons for snapshot at this time:

  • SPARC needs fix to cgns autodecomp routine in ioss to avoid 0 intervals on a zone
  • STK needs recent dynamic topology changes so they can snapshot
  • It has been a long time since last snapshot
  • The next snapshot will have more dynamic topology changes and want to somewhat isolate those changes.

Related Issues

  • Closes put-issue-number-here

Stakeholder Feedback

Testing

@gsjaardema gsjaardema added pkg: seacas AT: RETEST Causes the PR autotester to run a new round of PR tests on the next iteration AT: AUTOMERGE Causes the PR autotester to automatically merge the PR branch once approvals are completed client: SPARC Issues related to or needed more specifically by the ATDM SPARC code PA: Data Services Issues that fall under the Trilinos Data Services Product Area labels Jan 30, 2025
@gsjaardema gsjaardema self-assigned this Jan 30, 2025
@gsjaardema gsjaardema requested a review from a team as a code owner January 30, 2025 15:45
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Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

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Status Flag 'Pre-Test Inspection' - Auto Inspected - Inspection is Not Necessary for this Pull Request.

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Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

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  • Build Num: 1056
  • Status: STARTED

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Using Repos:

Repo: TRILINOS (gsjaardema/Trilinos)
  • Branch: SEACAS-snapshot-2025-01-try7
  • SHA: 54e562d
  • Mode: TEST_REPO

Pull Request Author: gsjaardema

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Status Flag 'Pull Request AutoTester' - Jenkins Testing: 1 or more Jobs FAILED

Note: Testing will normally be attempted again in approx. 2 Hrs 30 Mins. If a change to the PR source branch occurs, the testing will be attempted again on next available autotester run.

Pull Request Auto Testing has FAILED (click to expand)

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CDash Test Results for PR# 13762.


Wiki: How to Reproduce PR Testing Builds and Errors.

@trilinos-autotester trilinos-autotester removed the AT: RETEST Causes the PR autotester to run a new round of PR tests on the next iteration label Jan 30, 2025
@gsjaardema gsjaardema added the AT: RETEST Causes the PR autotester to run a new round of PR tests on the next iteration label Jan 30, 2025
@gsjaardema
Automatic snapshot commit from seacas at 94e88d4519
64d17de 
Origin repo remote tracking branch: 'origin/develop'
Origin repo remote repo URL: 'origin = https://github.com/sandialabs/seacas'
Git describe: i2024-11-15-47-gc376c98dfe

At commit:

commit 94e88d451990cea8ff5520c769e6d29e0fd7cb9d
Author:  Greg Sjaardema <[email protected]>
Date:    Tue Jan 28 15:58:59 2025 -0700
Summary: IOSS: cgns - minor tweak to decomposition algorithm to avoid 0 intervals

* Several files -- remove trailing whitespace
* Several -- Cleanups from compiler and static analyzer warnings
* Exodiff -- Use Namelist as alias for std::vector<std::string>, Rename class ExoII_Read to Exo_Read
* Aprepro -- better error detection/reporting.  Support string+string for concatenation in addition to //
* Aprepro -- add a `format` function to print variable using a specified output format.
* Exodus -- clean up lots of trailing whitespace in tests
* Exodus -- support additional compression algorithms

* IOSS -- New change-set (dynamic topology) code [Tolu primarily]
* IOSS -- cgns decomp - fix bug giving 0 intervals on a zone

* nem_slice -- Use enum class and rename some enums
* Compression -- add zstd, bz2, and lossy quantize compression to several apps

Signed-off-by: Greg Sjaardema <[email protected]>
@gsjaardema
Fix compiler warning about unused variable
c0c3a10 
Signed-off-by: Greg Sjaardema <[email protected]>
@gsjaardema gsjaardema force-pushed the SEACAS-snapshot-2025-01-try7 branch from e99cf57 to c0c3a10 Compare January 30, 2025 17:36
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Status Flag 'Pull Request AutoTester' - User Requested Retest - Label AT: RETEST will be reset after testing.

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Status Flag 'Pre-Test Inspection' - Auto Inspected - Inspection is Not Necessary for this Pull Request.

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Status Flag 'Pull Request AutoTester' - Testing Jenkins Projects:

Pull Request Auto Testing STARTING (click to expand)

Build Information

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PR_LABELS pkg: seacas;AT: RETEST;AT: AUTOMERGE;client: SPARC;PA: Data Services
PULLREQUESTNUM 13762
PULLREQUEST_CDASH_TRACK Pull Request
TEST_REPO_ALIAS TRILINOS
TRILINOS_NODE_LABEL rhel8
TRILINOS_SOURCE_REPO https://github.com/gsjaardema/Trilinos
TRILINOS_SOURCE_SHA c0c3a10
TRILINOS_SRN_CONFIG true
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 05e0df1

Build Information

Test Name: PR_cuda-uvm

  • Build Num: 1105
  • Status: STARTED

Jenkins Parameters

Parameter Name Value
FORCE_CLEAN true
GENCONFIG_BUILD_NAME rhel8_sems-cuda-11.4.2-gnu-10.1.0-openmpi-4.1.6_release_static_Volta70_no-asan_complex_no-fpic_mpi_pt_no-rdc_uvm_deprecated-on_no-package-enables
PR_LABELS pkg: seacas;AT: RETEST;AT: AUTOMERGE;client: SPARC;PA: Data Services
PULLREQUESTNUM 13762
PULLREQUEST_CDASH_TRACK Pull Request
TEST_REPO_ALIAS TRILINOS
TRILINOS_NODE_LABEL rhel8
TRILINOS_SOURCE_REPO https://github.com/gsjaardema/Trilinos
TRILINOS_SOURCE_SHA c0c3a10
TRILINOS_SRN_CONFIG true
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 05e0df1

Using Repos:

Repo: TRILINOS (gsjaardema/Trilinos)
  • Branch: SEACAS-snapshot-2025-01-try7
  • SHA: c0c3a10
  • Mode: TEST_REPO

Pull Request Author: gsjaardema

@trilinos-autotester
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Status Flag 'Pull Request AutoTester' - Jenkins Testing: all Jobs PASSED

Pull Request Auto Testing has PASSED (click to expand)

Build Information

Test Name: PR_gcc-openmpi-openmp

  • Build Num: 1057
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
FORCE_CLEAN true
GENCONFIG_BUILD_NAME rhel8_sems-gnu-8.5.0-openmpi-4.1.6-openmp_release-debug_static_no-kokkos-arch_no-asan_no-complex_no-fpic_mpi_no-pt_no-rdc_no-uvm_deprecated-on_no-package-enables
PR_LABELS pkg: seacas;AT: RETEST;AT: AUTOMERGE;client: SPARC;PA: Data Services
PULLREQUESTNUM 13762
PULLREQUEST_CDASH_TRACK Pull Request
TEST_REPO_ALIAS TRILINOS
TRILINOS_NODE_LABEL rhel8
TRILINOS_SOURCE_REPO https://github.com/gsjaardema/Trilinos
TRILINOS_SOURCE_SHA c0c3a10
TRILINOS_SRN_CONFIG true
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 05e0df1

Build Information

Test Name: PR_gcc

  • Build Num: 1107
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
BLOCKING_BUILD false
FORCE_CLEAN true
GENCONFIG_BUILD_NAME rhel8_sems-gnu-8.5.0-serial_release-debug_shared_no-kokkos-arch_no-asan_no-complex_no-fpic_no-mpi_no-pt_no-rdc_no-uvm_deprecated-on_no-package-enables
PR_LABELS pkg: seacas;AT: RETEST;AT: AUTOMERGE;client: SPARC;PA: Data Services
PULLREQUESTNUM 13762
PULLREQUEST_CDASH_TRACK Pull Request
TEST_REPO_ALIAS TRILINOS
TRILINOS_NODE_LABEL rhel8
TRILINOS_SOURCE_REPO https://github.com/gsjaardema/Trilinos
TRILINOS_SOURCE_SHA c0c3a10
TRILINOS_SRN_CONFIG true
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 05e0df1

Build Information

Test Name: PR_gcc-openmpi_debug

  • Build Num: 1108
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
FORCE_CLEAN true
GENCONFIG_BUILD_NAME rhel8_sems-gnu-8.5.0-openmpi-4.1.6-serial_debug_shared_no-kokkos-arch_no-asan_no-complex_no-fpic_mpi_no-pt_no-rdc_no-uvm_deprecated-on_no-package-enables
PR_LABELS pkg: seacas;AT: RETEST;AT: AUTOMERGE;client: SPARC;PA: Data Services
PULLREQUESTNUM 13762
PULLREQUEST_CDASH_TRACK Pull Request
TEST_REPO_ALIAS TRILINOS
TRILINOS_NODE_LABEL rhel8
TRILINOS_SOURCE_REPO https://github.com/gsjaardema/Trilinos
TRILINOS_SOURCE_SHA c0c3a10
TRILINOS_SRN_CONFIG true
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 05e0df1

Build Information

Test Name: PR_clang

  • Build Num: 1106
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
FORCE_CLEAN true
GENCONFIG_BUILD_NAME rhel8_sems-clang-11.0.1-openmpi-4.0.5-serial_release-debug_shared_no-kokkos-arch_no-asan_no-complex_no-fpic_mpi_no-pt_no-rdc_no-uvm_deprecated-on_no-package-enables
PR_LABELS pkg: seacas;AT: RETEST;AT: AUTOMERGE;client: SPARC;PA: Data Services
PULLREQUESTNUM 13762
PULLREQUEST_CDASH_TRACK Pull Request
TEST_REPO_ALIAS TRILINOS
TRILINOS_NODE_LABEL rhel8
TRILINOS_SOURCE_REPO https://github.com/gsjaardema/Trilinos
TRILINOS_SOURCE_SHA c0c3a10
TRILINOS_SRN_CONFIG true
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 05e0df1

Build Information

Test Name: PR_cuda

  • Build Num: 1105
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
FORCE_CLEAN true
GENCONFIG_BUILD_NAME rhel8_sems-cuda-11.4.2-gnu-10.1.0-openmpi-4.1.6_release_static_Volta70_no-asan_complex_no-fpic_mpi_pt_no-rdc_no-uvm_deprecated-on_no-package-enables
PR_LABELS pkg: seacas;AT: RETEST;AT: AUTOMERGE;client: SPARC;PA: Data Services
PULLREQUESTNUM 13762
PULLREQUEST_CDASH_TRACK Pull Request
TEST_REPO_ALIAS TRILINOS
TRILINOS_NODE_LABEL rhel8-gpu
TRILINOS_SOURCE_REPO https://github.com/gsjaardema/Trilinos
TRILINOS_SOURCE_SHA c0c3a10
TRILINOS_SRN_CONFIG true
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 05e0df1

Build Information

Test Name: PR_intel

  • Build Num: 1026
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
FORCE_CLEAN true
GENCONFIG_BUILD_NAME rhel8_sems-intel-2021.3-sems-openmpi-4.1.6_release-debug_shared_no-kokkos-arch_no-asan_no-complex_fpic_mpi_no-pt_no-rdc_no-uvm_deprecated-on_no-package-enables
PR_LABELS pkg: seacas;AT: RETEST;AT: AUTOMERGE;client: SPARC;PA: Data Services
PULLREQUESTNUM 13762
PULLREQUEST_CDASH_TRACK Pull Request
TEST_REPO_ALIAS TRILINOS
TRILINOS_NODE_LABEL rhel8
TRILINOS_SOURCE_REPO https://github.com/gsjaardema/Trilinos
TRILINOS_SOURCE_SHA c0c3a10
TRILINOS_SRN_CONFIG true
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 05e0df1

Build Information

Test Name: PR_cuda-uvm

  • Build Num: 1105
  • Status: PASSED

Jenkins Parameters

Parameter Name Value
FORCE_CLEAN true
GENCONFIG_BUILD_NAME rhel8_sems-cuda-11.4.2-gnu-10.1.0-openmpi-4.1.6_release_static_Volta70_no-asan_complex_no-fpic_mpi_pt_no-rdc_uvm_deprecated-on_no-package-enables
PR_LABELS pkg: seacas;AT: RETEST;AT: AUTOMERGE;client: SPARC;PA: Data Services
PULLREQUESTNUM 13762
PULLREQUEST_CDASH_TRACK Pull Request
TEST_REPO_ALIAS TRILINOS
TRILINOS_NODE_LABEL rhel8
TRILINOS_SOURCE_REPO https://github.com/gsjaardema/Trilinos
TRILINOS_SOURCE_SHA c0c3a10
TRILINOS_SRN_CONFIG true
TRILINOS_TARGET_BRANCH develop
TRILINOS_TARGET_REPO https://github.com/trilinos/Trilinos
TRILINOS_TARGET_SHA 05e0df1


CDash Test Results for PR# 13762.

@trilinos-autotester trilinos-autotester removed the AT: RETEST Causes the PR autotester to run a new round of PR tests on the next iteration label Jan 30, 2025
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Status Flag 'Pre-Merge Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
WARNING: NO REVIEWERS HAVE BEEN REQUESTED FOR THIS PULL REQUEST!

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All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

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Status Flag 'Pre-Merge Inspection' - - This Pull Request Requires Inspection... The code must be inspected by a member of the Team before Testing/Merging
NO REVIEWS HAVE BEEN PERFORMED ON THIS PULL REQUEST!

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All Jobs Finished; status = PASSED, However Inspection must be performed before merge can occur...

@gsjaardema
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@tokusanya @alanw0 Are either of you able to do a quick review of this Trilinos PR. Mainly dynamic topology changes and some whitespace removal and then other bug fixes.

Thanks.

alanw0
alanw0 approved these changes Jan 31, 2025
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I confess this is a rubber-stamp review, assuming all these changes were tested/reviewed before going into Seacas.

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Status Flag 'Pre-Merge Inspection' - SUCCESS: The last commit to this Pull Request has been INSPECTED AND APPROVED by [ alanw0 ]!

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Status Flag 'Pull Request AutoTester' - Pull Request will be Automerged

@trilinos-autotester trilinos-autotester merged commit 221f025 into trilinos:develop Jan 31, 2025
16 of 17 checks passed
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Merge on Pull Request# 13762: IS A SUCCESS - Pull Request successfully merged

@trilinos-autotester trilinos-autotester removed the AT: AUTOMERGE Causes the PR autotester to automatically merge the PR branch once approvals are completed label Jan 31, 2025
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@alanw0 Thanks.

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@alanw0 alanw0 alanw0 approved these changes

@rppawlo rppawlo Awaiting requested review from rppawlo

@ikalash ikalash Awaiting requested review from ikalash

@agsalin agsalin Awaiting requested review from agsalin

@ccober6 ccober6 Awaiting requested review from ccober6

@tokusanya tokusanya Awaiting requested review from tokusanya

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@gsjaardema @trilinos-autotester @alanw0