This repo contains all code used in this work. If you use this code, please cite our paper on biorxiv: _____.
The 01 Raw data
folder is not stored on GitHub - for raw sequencing data, see https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1107605.
All notebooks, python code, and Excel files used to generate figures, plots, and conclusions in the paper can be found in 02 Analyzed data
.
Authors: Alec Callisto, Jonathan Strutz, Reza Kalhor, Kathleen Leeper, George Church, Keith E.J. Tyo, Namita Bhan