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Welcome to the wiki for Graph Peak Caller!

Overview of topics

• Quickstart: Check out this repo's readme if you just want to install Graph Peak Caller and get started quickly.
• Building your own graphs from scratch.
• Graph-based ChIP-seq tutorial: A guide on how to use vg and graph-peak caller to go from raw reads to peaks.
• Graph Peak Caller Paper: How to run the analysis presented in the paper Graph Peak Caller