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Fix typo create-a-pipeline.qmd (#71)
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mberacochea authored Dec 22, 2023
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4 changes: 2 additions & 2 deletions guide/nextflow_vdsl3/create-a-pipeline.qmd
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Expand Up @@ -132,7 +132,7 @@ main.nf

Usually, Nextflow processes are quite static objects. For example, changing its directives can be quite tricky.

The `un()` function is a unique feature for every VDSL3 module which allows dynamically altering the behaviour of a module from within the pipeline. For example, we use it to set the `publishDir` directive to `"output/"` so the output of that step in the pipeline will be stored as output.
The `run()` function is a unique feature for every VDSL3 module which allows dynamically altering the behaviour of a module from within the pipeline. For example, we use it to set the `publishDir` directive to `"output/"` so the output of that step in the pipeline will be stored as output.

See the [reference documentation](/reference/nextflow_vdsl3/import_module.qmd#customizing-vdsl3-modules-on-the-fly) for a complete list of arguments of `.run()`.

Expand Down Expand Up @@ -174,4 +174,4 @@ knitr::opts_knit$set(root.dir = normalizePath("../"))
unlink(proj_dir, recursive = TRUE)
```

{{< include ../../_includes/_prune_all_images.qmd >}}
{{< include ../../_includes/_prune_all_images.qmd >}}

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