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* Better structures (#203) * allow single integer construction of C/D-vines * a few unit tests * export plot.rvine_matrix * unit tests for plot functions * add `var_names = "hide"` option in plot.vinecop_dist() * pass dots to plot.vinecop_dist() * fix plot.vinecop_dist() docs * fix tau->par for frank (#207) * fix tau->par for frank * update version and NEWS * some typos and doc formatting (#208) * switch to github actions (#204) * switch to github actions * what happened * no idea * do one check on R 3.5 * remove CRAN mirror on actions/linux * try different shell for escaping issue * escape one more? * change CI badge * Rcpp bug on macOS-3.5 RcppCore/Rcpp#1046 * same bug on macOS-3.6 * trigger * use R 4.0 * pull current dev (#209) * Prepare release (#210) * bump version * update NEWS * cran comments * update website
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@@ -14,3 +14,5 @@ | |
\.dll$ | ||
^src/update_vinecopulib\.sh$ | ||
^docs$ | ||
.github/ | ||
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@@ -0,0 +1,69 @@ | ||
on: [push, pull_request] | ||
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name: R-CMD-check | ||
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jobs: | ||
R-CMD-check: | ||
runs-on: ${{ matrix.config.os }} | ||
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name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | ||
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strategy: | ||
fail-fast: false | ||
matrix: | ||
config: | ||
- { os: windows-latest, r: '4.0', args: "--no-manual"} | ||
- { os: macOS-latest, r: 'devel', args: "--no-manual"} | ||
- { os: ubuntu-16.04, r: '3.6', args: "--no-manual" } | ||
- { os: ubuntu-16.04, r: '4.0', args: "--no-manual" } | ||
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env: | ||
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | ||
CRAN: ${{ matrix.config.cran }} | ||
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steps: | ||
- uses: actions/checkout@v1 | ||
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- uses: r-lib/actions/setup-r@master | ||
with: | ||
r-version: ${{ matrix.config.r }} | ||
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- uses: r-lib/actions/setup-pandoc@master | ||
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- uses: r-lib/actions/setup-tinytex@master | ||
if: contains(matrix.config.args, 'no-manual') == false | ||
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- name: Cache R packages | ||
if: runner.os != 'Windows' | ||
uses: actions/cache@v1 | ||
with: | ||
path: ${{ env.R_LIBS_USER }} | ||
key: ${{ runner.os }}-r-${{ matrix.config.r }}-${{ hashFiles('DESCRIPTION') }} | ||
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- name: Install system dependencies | ||
if: runner.os == 'Linux' | ||
env: | ||
RHUB_PLATFORM: linux-x86_64-ubuntu-gcc | ||
run: | | ||
Rscript -e "install.packages('remotes')" -e "remotes::install_github('r-hub/sysreqs')" | ||
sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") | ||
sudo -s eval "$sysreqs" | ||
- name: Install dependencies | ||
run: Rscript -e "install.packages('remotes')" -e "remotes::install_deps(dependencies = TRUE)" -e "remotes::install_cran('rcmdcheck')" | ||
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- name: Check | ||
run: Rscript -e "rcmdcheck::rcmdcheck(args = '${{ matrix.config.args }}', error_on = 'warning', check_dir = 'check')" | ||
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- name: Upload check results | ||
if: failure() | ||
uses: actions/upload-artifact@master | ||
with: | ||
name: ${{ runner.os }}-r${{ matrix.config.r }}-results | ||
path: check | ||
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- name: Test coverage | ||
if: matrix.config.os == 'macOS-latest' && matrix.config.r == '3.6' | ||
run: | | ||
Rscript -e 'remotes::install_github("r-lib/covr@gh-actions")' | ||
Rscript -e 'covr::codecov(line_exclusion = list.files(recursive = TRUE)[grep("^(?!.*wrappers).*\\\.(hpp|h|cpp|c|ipp)$", list.files(recursive = TRUE), perl = TRUE)], token = "${{secrets.CODECOV_TOKEN}}")' |
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@@ -1,7 +1,7 @@ | ||
Package: rvinecopulib | ||
Type: Package | ||
Title: High Performance Algorithms for Vine Copula Modeling | ||
Version: 0.5.1.1.0 | ||
Version: 0.5.2.1.0 | ||
Authors@R: c( | ||
person("Thomas", "Nagler",, "[email protected]", role = c("aut", "cre")), | ||
person("Thibault", "Vatter",, "[email protected]", role = c("aut")) | ||
|
@@ -13,7 +13,7 @@ Description: Provides an interface to 'vinecopulib', a C++ library for vine | |
and more modern API, improved performances, especially in high dimensions, | ||
nonparametric and multi-parameter families, and the ability to model discrete | ||
variables. The 'rvinecopulib' package includes 'vinecopulib' as header-only | ||
C++ library (currently version 0.5.1). Thus users do not need to install | ||
C++ library (currently version 0.5.2). Thus users do not need to install | ||
'vinecopulib' itself in order to use 'rvinecopulib'. Since their initial | ||
releases, 'vinecopulib' is licensed under the MIT License, and 'rvinecopulib' | ||
is licensed under the GNU GPL version 3. | ||
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@@ -45,4 +45,4 @@ LinkingTo: | |
BugReports: https://github.com/vinecopulib/rvinecopulib/issues | ||
Roxygen: list(markdown = TRUE) | ||
SystemRequirements: C++11 | ||
RoxygenNote: 7.0.0 | ||
RoxygenNote: 7.1.0 |
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