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Generalized stochastic simulations, improved VCell ImageJ Plugin

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@jcschaff jcschaff released this 27 Sep 18:01
· 469 commits to master since this release
9156f37
  • Expanded rate laws for stochastic simulations. Previously VCell had only supported mass action rate laws for stochastic simulations. This Release allows any rate law expressed for an ODE simulation to be simulated stochastically.

  • VCell ImageJ plugin has improved usability and performance for analyzing large VCell simulation datasets served remotely using the cloud ready N5 format. Data transfer is much faster and simulation data is resampled for improved ImageJ compatibility.