Add unit tests for `replica_exchange_EE.py`, the `utils` module and a part of the `analysis` module#37

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wehs7661 merged 43 commits intomasterfrom add_tests

Apr 9, 2024

+3,438-166

Commits on Mar 25, 2024

Commits on Mar 30, 2024

Added a test for plot_state_hist
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Commits on Mar 31, 2024

Added a test for calc_hist_rmse and plot_transit_time
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Commits on Apr 3, 2024

Some intermediate work for test_plot_g_vecs
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Merge branch 'master' of https://github.com/wehs7661/ensemble_md into add_tests
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Modified calc_spectral_gap to allow uncertainty estimation; Added synthesize_transmtx
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Added synthesize_data.py to ensemble_md.analysis
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Removed synthesize_transmtx from analyze_matrix.py; Simplified synthesize_transmtx in synthesize_data.py
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Modified calc_spectral_gap and added calc_t_relax
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Fixed the linting error; Modified calc_spectral_gap
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Merge pull request #39 from wehs7661/spectral_gap_err
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Commits on Apr 6, 2024

Refined some previously written tests
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Commits on Apr 9, 2024