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Merge branch 'master' of https://github.com/xieguigang/mzkit
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xieguigang committed Nov 14, 2024
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<title>.extract_pubmed_evidence</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
6 changes: 3 additions & 3 deletions Rscript/Library/mzkit_app/vignettes/R/docs/.graph_table.html
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<title>.graph_table</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
6 changes: 3 additions & 3 deletions Rscript/Library/mzkit_app/vignettes/R/docs/.onLoad.html
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<title>Hello, world! This is an example function named 'hello' which prints 'Hello, world!'. You can learn more about package authoring with RStudio at: http://r-pkgs.had.co.nz/ Some useful keyboard shortcuts for package authoring: Install Package: 'Ctrl + Shift + B' Check Package: 'Ctrl + Shift + E' Test Package: 'Ctrl + Shift + T'</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
6 changes: 3 additions & 3 deletions Rscript/Library/mzkit_app/vignettes/R/docs/.term_maps.html
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<title>.term_maps</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
6 changes: 3 additions & 3 deletions Rscript/Library/mzkit_app/vignettes/R/docs/ANOVAGroup.html
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<title>Create a dataset for evaluate ANOVA p-value</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
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<title>Create content levels table</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
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<title>GCMS_linearReport</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
6 changes: 3 additions & 3 deletions Rscript/Library/mzkit_app/vignettes/R/docs/GCMS_linears.html
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<title>Create reference linears for GCMS sim data</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
6 changes: 3 additions & 3 deletions Rscript/Library/mzkit_app/vignettes/R/docs/GCMS_quantify.html
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<title>GCMS_quantify</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
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<title>__deconv_gcms_single</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
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<title>export XIC data for a single rawdata file</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
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<title>Convert to mzpack data object</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
6 changes: 3 additions & 3 deletions Rscript/Library/mzkit_app/vignettes/R/docs/deconv_gcms.html
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<title>Make expression peak table deconvolution of the GCMS rawdata</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
6 changes: 3 additions & 3 deletions Rscript/Library/mzkit_app/vignettes/R/docs/getDataValues.html
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<title>get values in section$data</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
6 changes: 3 additions & 3 deletions Rscript/Library/mzkit_app/vignettes/R/docs/getQuery.html
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<title>getQuery</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
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<title>Get n representive spectrums via molecular networking</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
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<title>Read ion pairs data from MSL dataset</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

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<title>Load the kegg database for the annotation</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

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<title>Query pubchem for knowledge network</title>
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<meta name="viewport" content="width=device-width, initial-scale=1.0, user-scalable=yes" />
<link rel="stylesheet" type="text/css" href="https://mzkit.org/assets/js/page.css">
<link rel="stylesheet" type="text/css" href="../../_assets/page.css">
</head>

<body>
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</div>
</body>

<script type="text/javascript" src="https://mzkit.org/assets/js/R_syntax.js"></script>
<script type="text/javascript" src="https://mzkit.org/assets/js/highlights.js"></script>
<script type="text/javascript" src="../../_assets/R_syntax.js"></script>
<script type="text/javascript" src="../../_assets/highlights.js"></script>
<script type="text/javascript">r_highlights("example_r");</script>

</html>
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