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Update glmnet to use latest source from R package #2028

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merged 4 commits into from
Nov 1, 2020
Merged

Update glmnet to use latest source from R package #2028

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a7bb23d
Update glmnet to use latest source from R package
JackDunnNZ Nov 1, 2020
efa6bd0
Add CSL
JackDunnNZ Nov 1, 2020
0608a15
Update G/glmnet/build_tarballs.jl
JackDunnNZ Nov 1, 2020
8f3be93
Update G/glmnet/build_tarballs.jl
JackDunnNZ Nov 1, 2020
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27 changes: 17 additions & 10 deletions G/glmnet/build_tarballs.jl
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Original file line number Diff line number Diff line change
Expand Up @@ -3,29 +3,35 @@
using BinaryBuilder, Pkg

name = "glmnet"
version = v"5.0.0"
version = v"4.0.2"

# Collection of sources required to complete build
sources = [
GitSource("https://github.com/JuliaStats/GLMNet.jl.git", "d8cab55556a8c184a879446476efcc35e68a3eee"),
GitSource("https://github.com/cran/glmnet.git", "b1a4b50de01e0cd24343959d7cf86452bac17b26")
]

# Bash recipe for building across all platforms
script = raw"""
cd $WORKSPACE/srcdir/GLMNet.jl/deps/
cd $WORKSPACE/srcdir/glmnet/src

# Add stub for `setpb`, which normally comes from `pb.c` to connect the
# progress meter to R, but we don't need that
echo "
subroutine setpb(val)
return
end
" > pb.f

flags="-fdefault-real-8 -ffixed-form -shared -O3"
if [[ ${target} != *mingw* ]]; then
flags="${flags} -fPIC"
flags="${flags} -fPIC";
fi
if [[ ${target} != aarch64* ]] && [[ ${target} != arm* ]]; then
flags="${flags} -m${nbits}"
flags="${flags} -m${nbits}";
Comment on lines +27 to +30
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Why? 😅

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Lol I didn't see this, I think it must have been added when I pasted the old script into the wizard 😅

Can remove if you like

fi

${FC} ${LDFLAGS} ${flags} glmnet5.f90 -o libglmnet.${dlext}

mkdir -p $libdir
mv libglmnet.${dlext} $libdir/
mkdir -p ${libdir}
${FC} ${LDFLAGS} ${flags} glmnet5dpclean.f wls.f pb.f -o ${libdir}/libglmnet.${dlext}
install_license DESCRIPTION
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"""

# These are the platforms we will build for by default, unless further
Expand All @@ -39,6 +45,7 @@ products = [

# Dependencies that must be installed before this package can be built
dependencies = Dependency[
Dependency(PackageSpec(name="CompilerSupportLibraries_jll", uuid="e66e0078-7015-5450-92f7-15fbd957f2ae"))
]

# Build the tarballs, and possibly a `build.jl` as well.
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