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10 way split on candidates v2
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gzuidhof committed Jul 26, 2016
1 parent 6b91404 commit bd6ecca
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Showing 11 changed files with 331 additions and 13 deletions.
4 changes: 2 additions & 2 deletions config/resnet56_0_diag.ini
Original file line number Diff line number Diff line change
Expand Up @@ -26,10 +26,10 @@ gaussian_noise: 0.05
optimization: -
learning_rate: 0 ;not used, see schedule
momentum: 0.90
l2_lambda: 0.00002
l2_lambda: 0.00001
batch_size_train: 72
batch_size_validation: 138
n_epochs: 240
n_epochs: 220

[preprocessing] ;Not used
random_crop: 0 ;no cropping
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4 changes: 2 additions & 2 deletions config/resnet56_1_diag.ini
Original file line number Diff line number Diff line change
Expand Up @@ -26,10 +26,10 @@ gaussian_noise: 0.05
optimization: -
learning_rate: 0 ;not used, see schedule
momentum: 0.90
l2_lambda: 0.00002
l2_lambda: 0.00001
batch_size_train: 72
batch_size_validation: 138
n_epochs: 240
n_epochs: 220

[preprocessing] ;Not used
random_crop: 0 ;no cropping
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4 changes: 2 additions & 2 deletions config/resnet56_2_diag.ini
Original file line number Diff line number Diff line change
Expand Up @@ -26,10 +26,10 @@ gaussian_noise: 0.05
optimization: -
learning_rate: 0 ;not used, see schedule
momentum: 0.90
l2_lambda: 0.00002
l2_lambda: 0.00001
batch_size_train: 72
batch_size_validation: 138
n_epochs: 240
n_epochs: 220

[preprocessing] ;Not used
random_crop: 0 ;no cropping
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53 changes: 53 additions & 0 deletions config/resnet56_3_diag.ini
Original file line number Diff line number Diff line change
@@ -0,0 +1,53 @@
[info]
experiment: ResNet default settings
name: OWN2_resnet56_3

[dataset]
pixels: 96
n_classes: 2
channels: 1
subset: None
filenames_train: /media/diskB/guido/luna16/candidates_v2_0.5mm_96x96_xy_xz_yz/subset[01452789]/*/*.pkl.gz
filenames_validation: /media/diskB/guido/luna16/candidates_v2_0.5mm_96x96_xy_xz_yz/subset[6]/*/*.pkl.gz
data_folder: None ;not used

[network]
architecture: resnet
input_size: 64
depth: 5
branching_factor: 6
batch_normalization: True
batch_normalization_alpha: 0.1
dropout: 0.25
spatial_dropout: 0.5
gaussian_noise: 0.05

[updates]
optimization: -
learning_rate: 0 ;not used, see schedule
momentum: 0.90
l2_lambda: 0.00001
batch_size_train: 72
batch_size_validation: 138
n_epochs: 220

[preprocessing] ;Not used
random_crop: 0 ;no cropping
erode_segmentation: 11

[normalization]
zero_center: True
mean_pixel: 0.2606236106512

[augmentation]
augment: True
flip: True
zoom: 0.1
rotation: 20
translation: 3


[misc]
multiprocess_load_augmentation: False
save_every_n_epoch: 2
n_workers_load_augmentation: 1
53 changes: 53 additions & 0 deletions config/resnet56_4_diag.ini
Original file line number Diff line number Diff line change
@@ -0,0 +1,53 @@
[info]
experiment: ResNet default settings
name: OWN2_resnet56_4

[dataset]
pixels: 96
n_classes: 2
channels: 1
subset: None
filenames_train: /media/diskB/guido/luna16/candidates_v2_0.5mm_96x96_xy_xz_yz/subset[01352789]/*/*.pkl.gz
filenames_validation: /media/diskB/guido/luna16/candidates_v2_0.5mm_96x96_xy_xz_yz/subset[6]/*/*.pkl.gz
data_folder: None ;not used

[network]
architecture: resnet
input_size: 64
depth: 5
branching_factor: 6
batch_normalization: True
batch_normalization_alpha: 0.1
dropout: 0.25
spatial_dropout: 0.5
gaussian_noise: 0.05

[updates]
optimization: -
learning_rate: 0 ;not used, see schedule
momentum: 0.90
l2_lambda: 0.00001
batch_size_train: 72
batch_size_validation: 138
n_epochs: 220

[preprocessing] ;Not used
random_crop: 0 ;no cropping
erode_segmentation: 11

[normalization]
zero_center: True
mean_pixel: 0.2606236106512

[augmentation]
augment: True
flip: True
zoom: 0.1
rotation: 20
translation: 3


[misc]
multiprocess_load_augmentation: False
save_every_n_epoch: 2
n_workers_load_augmentation: 1
53 changes: 53 additions & 0 deletions config/resnet56_5_diag.ini
Original file line number Diff line number Diff line change
@@ -0,0 +1,53 @@
[info]
experiment: ResNet default settings
name: OWN2_resnet56_5

[dataset]
pixels: 96
n_classes: 2
channels: 1
subset: None
filenames_train: /media/diskB/guido/luna16/candidates_v2_0.5mm_96x96_xy_xz_yz/subset[01246789]/*/*.pkl.gz
filenames_validation: /media/diskB/guido/luna16/candidates_v2_0.5mm_96x96_xy_xz_yz/subset[3]/*/*.pkl.gz
data_folder: None ;not used

[network]
architecture: resnet
input_size: 64
depth: 5
branching_factor: 6
batch_normalization: True
batch_normalization_alpha: 0.1
dropout: 0.25
spatial_dropout: 0.5
gaussian_noise: 0.05

[updates]
optimization: -
learning_rate: 0 ;not used, see schedule
momentum: 0.90
l2_lambda: 0.00001
batch_size_train: 72
batch_size_validation: 138
n_epochs: 220

[preprocessing] ;Not used
random_crop: 0 ;no cropping
erode_segmentation: 11

[normalization]
zero_center: True
mean_pixel: 0.2606236106512

[augmentation]
augment: True
flip: True
zoom: 0.1
rotation: 20
translation: 3


[misc]
multiprocess_load_augmentation: False
save_every_n_epoch: 2
n_workers_load_augmentation: 1
53 changes: 53 additions & 0 deletions config/resnet56_6_diag.ini
Original file line number Diff line number Diff line change
@@ -0,0 +1,53 @@
[info]
experiment: ResNet default settings
name: OWN2_resnet56_6

[dataset]
pixels: 96
n_classes: 2
channels: 1
subset: None
filenames_train: /media/diskB/guido/luna16/candidates_v2_0.5mm_96x96_xy_xz_yz/subset[01245789]/*/*.pkl.gz
filenames_validation: /media/diskB/guido/luna16/candidates_v2_0.5mm_96x96_xy_xz_yz/subset[3]/*/*.pkl.gz
data_folder: None ;not used

[network]
architecture: resnet
input_size: 64
depth: 5
branching_factor: 6
batch_normalization: True
batch_normalization_alpha: 0.1
dropout: 0.25
spatial_dropout: 0.5
gaussian_noise: 0.05

[updates]
optimization: -
learning_rate: 0 ;not used, see schedule
momentum: 0.90
l2_lambda: 0.00001
batch_size_train: 72
batch_size_validation: 138
n_epochs: 220

[preprocessing] ;Not used
random_crop: 0 ;no cropping
erode_segmentation: 11

[normalization]
zero_center: True
mean_pixel: 0.2606236106512

[augmentation]
augment: True
flip: True
zoom: 0.1
rotation: 20
translation: 3


[misc]
multiprocess_load_augmentation: False
save_every_n_epoch: 2
n_workers_load_augmentation: 1
53 changes: 53 additions & 0 deletions config/resnet56_7_diag.ini
Original file line number Diff line number Diff line change
@@ -0,0 +1,53 @@
[info]
experiment: ResNet default settings
name: OWN2_resnet56_7

[dataset]
pixels: 96
n_classes: 2
channels: 1
subset: None
filenames_train: /media/diskB/guido/luna16/candidates_v2_0.5mm_96x96_xy_xz_yz/subset[01345689]/*/*.pkl.gz
filenames_validation: /media/diskB/guido/luna16/candidates_v2_0.5mm_96x96_xy_xz_yz/subset[2]/*/*.pkl.gz
data_folder: None ;not used

[network]
architecture: resnet
input_size: 64
depth: 5
branching_factor: 6
batch_normalization: True
batch_normalization_alpha: 0.1
dropout: 0.25
spatial_dropout: 0.5
gaussian_noise: 0.05

[updates]
optimization: -
learning_rate: 0 ;not used, see schedule
momentum: 0.90
l2_lambda: 0.00001
batch_size_train: 72
batch_size_validation: 128
n_epochs: 240

[preprocessing] ;Not used
random_crop: 0 ;no cropping
erode_segmentation: 11

[normalization]
zero_center: True
mean_pixel: 0.2606236106512

[augmentation]
augment: True
flip: True
zoom: 0.1
rotation: 20
translation: 3


[misc]
multiprocess_load_augmentation: False
save_every_n_epoch: 2
n_workers_load_augmentation: 4
53 changes: 53 additions & 0 deletions config/resnet56_8_diag.ini
Original file line number Diff line number Diff line change
@@ -0,0 +1,53 @@
[info]
experiment: ResNet default settings
name: OWN2_resnet56_8

[dataset]
pixels: 96
n_classes: 2
channels: 1
subset: None
filenames_train: /media/diskB/guido/luna16/candidates_v2_0.5mm_96x96_xy_xz_yz/subset[01345679]/*/*.pkl.gz
filenames_validation: /media/diskB/guido/luna16/candidates_v2_0.5mm_96x96_xy_xz_yz/subset[2]/*/*.pkl.gz
data_folder: None ;not used

[network]
architecture: resnet
input_size: 64
depth: 5
branching_factor: 6
batch_normalization: True
batch_normalization_alpha: 0.1
dropout: 0.25
spatial_dropout: 0.5
gaussian_noise: 0.05

[updates]
optimization: -
learning_rate: 0 ;not used, see schedule
momentum: 0.90
l2_lambda: 0.00001
batch_size_train: 72
batch_size_validation: 128
n_epochs: 240

[preprocessing] ;Not used
random_crop: 0 ;no cropping
erode_segmentation: 11

[normalization]
zero_center: True
mean_pixel: 0.2606236106512

[augmentation]
augment: True
flip: True
zoom: 0.1
rotation: 20
translation: 3


[misc]
multiprocess_load_augmentation: False
save_every_n_epoch: 2
n_workers_load_augmentation: 4
4 changes: 2 additions & 2 deletions config/resnet56_9_diag.ini
Original file line number Diff line number Diff line change
Expand Up @@ -26,10 +26,10 @@ gaussian_noise: 0.05
optimization: -
learning_rate: 0 ;not used, see schedule
momentum: 0.90
l2_lambda: 0.00002
l2_lambda: 0.00001
batch_size_train: 72
batch_size_validation: 138
n_epochs: 240
n_epochs: 220

[preprocessing] ;Not used
random_crop: 0 ;no cropping
Expand Down
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