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@monarch-initiative

Monarch Initiative

Cross-species disease discovery and diagnosis

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  1. mondo mondo Public template

    Mondo Disease Ontology

    Jupyter Notebook 237 53

  2. koza koza Public

    Data transformation framework for LinkML data models

    Python 48 4

  3. MAxO MAxO Public

    Medical action ontology

    HTML 52 4

  4. helpdesk helpdesk Public

    The Monarch Initiative Helpdesk

    7

  5. monarch-ingest monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    Python 15 1

  6. monarch-app monarch-app Public

    Monarch Initiative website and API

    Python 18 6

Repositories

Showing 10 of 237 repositories
  • phenio Public

    An integrated ontology for Phenomics

    monarch-initiative/phenio’s past year of commit activity
    Makefile 6 BSD-3-Clause 0 27 2 Updated Nov 16, 2024
  • closurizer Public

    Add closure expansion fields to kgx files following the Golr pattern

    monarch-initiative/closurizer’s past year of commit activity
    Python 4 0 1 0 Updated Nov 16, 2024
  • mondo-ingest Public

    Coordinating the mondo-ingest with external sources

    monarch-initiative/mondo-ingest’s past year of commit activity
    Jupyter Notebook 6 3 222 (1 issue needs help) 16 Updated Nov 16, 2024
  • monarch-app Public

    Monarch Initiative website and API

    monarch-initiative/monarch-app’s past year of commit activity
    Python 18 BSD-3-Clause 6 181 (3 issues need help) 8 Updated Nov 15, 2024
  • monarch-ingest Public

    Data ingest application for Monarch Initiative knowledge graph using Koza

    monarch-initiative/monarch-ingest’s past year of commit activity
    Python 15 1 31 1 Updated Nov 15, 2024
  • gpsea Public

    A Python library for discovery of genotype-phenotype associations

    monarch-initiative/gpsea’s past year of commit activity
    Python 5 MIT 1 26 3 Updated Nov 15, 2024
  • curategpt Public

    LLM-driven curation assist tool

    monarch-initiative/curategpt’s past year of commit activity
    Jupyter Notebook 70 BSD-3-Clause 12 24 4 Updated Nov 15, 2024
  • maxo-annotation-ingest Public
    monarch-initiative/maxo-annotation-ingest’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Nov 15, 2024
  • mondo Public template

    Mondo Disease Ontology

    monarch-initiative/mondo’s past year of commit activity
    Jupyter Notebook 237 CC-BY-4.0 53 359 (2 issues need help) 38 Updated Nov 15, 2024
  • monarch-mapping-commons Public

    Building a fully exectuable workflow for boomer

    monarch-initiative/monarch-mapping-commons’s past year of commit activity
    Python 4 CC0-1.0 3 14 1 Updated Nov 15, 2024
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