Merge pull request #232 from monarch-initiative/release07032023

Release 7 March
monarch-initiative · Mar 8, 2023 · 12601d7 · 12601d7
2 parents bff5538 + 00f0cc1
commit 12601d7
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diff --git a/docs/metrics/doid.md b/docs/metrics/doid.md
@@ -2,16 +2,16 @@
 
 **IRI:** http://purl.obolibrary.org/obo/mondo/sources/doid.owl
 
-**Version IRI:** http://purl.obolibrary.org/obo/mondo/sources/2023-01-21/doid.owl
+**Version IRI:** http://purl.obolibrary.org/obo/mondo/sources/2023-03-07/doid.owl
 
 ### Entities and axioms
 
 | Metric | Value |
 | ------ | ----- |
 | Annotation properties | 25 |
-| Axioms | 106279 |
-| Logical axioms | 15451 |
-| Classes | 12704 |
+| Axioms | 106470 |
+| Logical axioms | 15508 |
+| Classes | 12738 |
 | Object properties | 2 |
 | Data properties | 0 |
 | Individuals | 0 |
@@ -21,21 +21,21 @@
 
 | Metric | Value |
 | ------ | ----- |
-| Expressivity | ALC |
+| Expressivity | C |
 | OWL2 | True |
-| OWL2 DL | False |
-| OWL2 EL | False |
-| OWL2 QL | False |
-| OWL2 RL | False |
+| OWL2 DL | True |
+| OWL2 EL | True |
+| OWL2 QL | True |
+| OWL2 RL | True |
 
 #### Axiom types
 
 | Metric | Value |
 | ------ | ----- |
-| AnnotationAssertion | 78107 |
+| AnnotationAssertion | 78199 |
 | DisjointClasses | 26 |
-| Declaration | 12721 |
-| SubClassOf | 15425 |
+| Declaration | 12763 |
+| SubClassOf | 15482 |
 
 
 #### Entity namespaces: axiom counts by namespace
@@ -44,10 +44,10 @@
 | ------ | ----- |
 | oboInOwl | 11 |
 | owl | 2 |
-| DOID | 11182 |
+| DOID | 11217 |
 | HP | 106 |
-| xsd | 2 |
-| CL | 63 |
+| xsd | 1 |
+| CL | 60 |
 | skos | 5 |
 | BFO | 2 |
 | rdfs | 2 |
@@ -60,17 +60,17 @@
 | CHEBI | 90 |
 | IAO | 2 |
 | UBERON | 391 |
-| SO | 16 |
+| SO | 17 |
 | obo | 191 |
-| GENO | 9 |
+| GENO | 10 |
 | dc | 1 |
 
 
 #### Class expressions used
 
 | Metric | Value |
 | ------ | ----- |
-| Class | 43766 |
+| Class | 43914 |
 
 
 More information about the source can be found [in the documentation](../sources.md). The raw data (ontology metrics) can be found [on GitHub](https://github.com/monarch-initiative/mondo-ingest/tree/main/src/ontology/metadata).

diff --git a/docs/metrics/icd10cm.md b/docs/metrics/icd10cm.md
@@ -2,7 +2,7 @@
 
 **IRI:** http://purl.obolibrary.org/obo/mondo/sources/icd10cm.owl
 
-**Version IRI:** http://purl.obolibrary.org/obo/mondo/sources/2023-01-21/icd10cm.owl
+**Version IRI:** http://purl.obolibrary.org/obo/mondo/sources/2023-03-07/icd10cm.owl
 
 ### Entities and axioms
 
@@ -21,7 +21,7 @@
 
 | Metric | Value |
 | ------ | ----- |
-| Expressivity | AL |
+| Expressivity |  |
 | OWL2 | True |
 | OWL2 DL | True |
 | OWL2 EL | True |

diff --git a/docs/metrics/icd10who.md b/docs/metrics/icd10who.md
@@ -2,7 +2,7 @@
 
 **IRI:** http://purl.obolibrary.org/obo/mondo/sources/icd10who.owl
 
-**Version IRI:** http://purl.obolibrary.org/obo/mondo/sources/2023-01-21/icd10who.owl
+**Version IRI:** http://purl.obolibrary.org/obo/mondo/sources/2023-03-07/icd10who.owl
 
 ### Entities and axioms
 
@@ -21,7 +21,7 @@
 
 | Metric | Value |
 | ------ | ----- |
-| Expressivity | AL |
+| Expressivity |  |
 | OWL2 | True |
 | OWL2 DL | True |
 | OWL2 EL | True |

diff --git a/docs/metrics/ncit.md b/docs/metrics/ncit.md
@@ -2,14 +2,14 @@
 
 **IRI:** http://purl.obolibrary.org/obo/mondo/sources/ncit.owl
 
-**Version IRI:** http://purl.obolibrary.org/obo/mondo/sources/2023-01-21/ncit.owl
+**Version IRI:** http://purl.obolibrary.org/obo/mondo/sources/2023-03-07/ncit.owl
 
 ### Entities and axioms
 
 | Metric | Value |
 | ------ | ----- |
 | Annotation properties | 12 |
-| Axioms | 566977 |
+| Axioms | 566981 |
 | Logical axioms | 38246 |
 | Classes | 20867 |
 | Object properties | 0 |
@@ -21,9 +21,9 @@
 
 | Metric | Value |
 | ------ | ----- |
-| Expressivity | AL |
+| Expressivity | CINT |
 | OWL2 | True |
-| OWL2 DL | False |
+| OWL2 DL | True |
 | OWL2 EL | False |
 | OWL2 QL | False |
 | OWL2 RL | False |
@@ -35,7 +35,7 @@
 | AnnotationAssertion | 507838 |
 | EquivalentClasses | 5479 |
 | DatatypeDefinition | 19 |
-| Declaration | 20893 |
+| Declaration | 20897 |
 | SubClassOf | 32748 |
 
 

diff --git a/docs/metrics/omim.md b/docs/metrics/omim.md
@@ -2,16 +2,16 @@
 
 **IRI:** http://purl.obolibrary.org/obo/mondo/sources/omim.owl
 
-**Version IRI:** http://purl.obolibrary.org/obo/mondo/sources/2023-01-21/omim.owl
+**Version IRI:** http://purl.obolibrary.org/obo/mondo/sources/2023-03-07/omim.owl
 
 ### Entities and axioms
 
 | Metric | Value |
 | ------ | ----- |
-| Annotation properties | 11 |
-| Axioms | 349908 |
-| Logical axioms | 35555 |
-| Classes | 31164 |
+| Annotation properties | 13 |
+| Axioms | 369157 |
+| Logical axioms | 35634 |
+| Classes | 31205 |
 | Object properties | 6 |
 | Data properties | 0 |
 | Individuals | 0 |
@@ -21,7 +21,7 @@
 
 | Metric | Value |
 | ------ | ----- |
-| Expressivity | ALE |
+| Expressivity | E |
 | OWL2 | True |
 | OWL2 DL | True |
 | OWL2 EL | True |
@@ -32,35 +32,36 @@
 
 | Metric | Value |
 | ------ | ----- |
-| AnnotationAssertion | 283176 |
-| Declaration | 31177 |
-| SubClassOf | 35555 |
+| AnnotationAssertion | 302303 |
+| Declaration | 31220 |
+| SubClassOf | 35634 |
 
 
 #### Entity namespaces: axiom counts by namespace
 
 | Metric | Value |
 | ------ | ----- |
-| prefix_unknown | 29725 |
+| prefix_unknown | 29765 |
 | oboInOwl | 3 |
 | owl | 2 |
-| rdf | 1 |
-| IAO | 2 |
 | xsd | 1 |
 | skos | 1 |
 | rdfs | 2 |
-| CHR | 1438 |
+| CHR | 1439 |
+| MONDO | 1 |
+| rdf | 1 |
+| IAO | 2 |
 | SO | 1 |
-| biolink | 1 |
+| biolink | 2 |
 | RO | 6 |
 
 
 #### Class expressions used
 
 | Metric | Value |
 | ------ | ----- |
-| Class | 102268 |
-| ObjectSomeValuesFrom | 14008 |
+| Class | 102467 |
+| ObjectSomeValuesFrom | 14050 |
 
 
 More information about the source can be found [in the documentation](../sources.md). The raw data (ontology metrics) can be found [on GitHub](https://github.com/monarch-initiative/mondo-ingest/tree/main/src/ontology/metadata).

diff --git a/docs/metrics/ordo.md b/docs/metrics/ordo.md
@@ -2,16 +2,16 @@
 
 **IRI:** http://purl.obolibrary.org/obo/mondo/sources/ordo.owl
 
-**Version IRI:** http://purl.obolibrary.org/obo/mondo/sources/2023-01-21/ordo.owl
+**Version IRI:** http://purl.obolibrary.org/obo/mondo/sources/2023-03-07/ordo.owl
 
 ### Entities and axioms
 
 | Metric | Value |
 | ------ | ----- |
-| Annotation properties | 7 |
-| Axioms | 133498 |
-| Logical axioms | 40547 |
-| Classes | 13365 |
+| Annotation properties | 8 |
+| Axioms | 140852 |
+| Logical axioms | 41964 |
+| Classes | 14783 |
 | Object properties | 3 |
 | Data properties | 0 |
 | Individuals | 0 |
@@ -21,7 +21,7 @@
 
 | Metric | Value |
 | ------ | ----- |
-| Expressivity | ALE |
+| Expressivity | E |
 | OWL2 | True |
 | OWL2 DL | True |
 | OWL2 EL | True |
@@ -32,19 +32,21 @@
 
 | Metric | Value |
 | ------ | ----- |
-| AnnotationAssertion | 79577 |
-| Declaration | 13374 |
-| SubClassOf | 40547 |
+| AnnotationAssertion | 84096 |
+| Declaration | 14792 |
+| SubClassOf | 41964 |
 
 
 #### Entity namespaces: axiom counts by namespace
 
 | Metric | Value |
 | ------ | ----- |
-| prefix_unknown | 13365 |
+| prefix_unknown | 14783 |
 | oboInOwl | 5 |
+| owl | 1 |
 | rdf | 1 |
 | IAO | 1 |
+| xsd | 1 |
 | rdfs | 1 |
 | RO | 3 |
 
@@ -53,7 +55,7 @@
 
 | Metric | Value |
 | ------ | ----- |
-| Class | 94459 |
+| Class | 98711 |
 | ObjectSomeValuesFrom | 6572 |