Skip to content

Releases: monarch-initiative/phenio

2025-02-10

10 Feb 16:31
52126e8
Compare
Choose a tag to compare

What's Changed

Full Changelog: v2025-01-30...v2025-02-10

2025-01-30

30 Jan 21:53
d592b2d
Compare
Choose a tag to compare

What's Changed

  • Source updates, including for the CHEBI slim
  • Update README.md with new phenio.owl.gz link by @caufieldjh in #104
  • Add mechanism to retrieve missing CHEBI ids and include them in build by @caufieldjh in #106

Full Changelog: v2024-12-10...v2025-01-30

2024-12-10

10 Dec 21:00
cbd1264
Compare
Choose a tag to compare

What's Changed

New Contributors

Full Changelog: v2024-11-27...v2024-12-10

2024-11-27

27 Nov 15:17
a556d1b
Compare
Choose a tag to compare

Note: release files have changed:

  • phenio-relation-graph.tar.gz is now phenio-relation-graph.tsv.gz
  • phenio.owl.tar.gz is now phenio.owl.gz (just phenio.owl, but compressed)

What's Changed

  • Switch to use uPheno base and import phenotype ontologies separately by @matentzn in #94
  • Add a few missing pieces for a working pipeline by @matentzn in #97

Full Changelog: v2024-11-18...v2024-11-27

2024-11-25

25 Nov 23:24
2f56804
Compare
Choose a tag to compare

Overview

This is a major update, including:

  • A full restructuring of imports
  • Removal of many dangling edges
  • Inclusion of MAXO

Note that phenio.owl is now compressed. The decompressed file is ~2.8G on disk.

What's Changed

  • Switch to use uPheno base and import phenotype ontologies separately by @matentzn in #94
  • Add a few missing pieces for a working pipeline by @matentzn in #97

Full Changelog: v2024-11-18...v2024-11-25

2024-11-18

18 Nov 16:07
d883821
Compare
Choose a tag to compare
2024-11-18 Pre-release
Pre-release

What's Changed

Full Changelog: v2024-11-01...v2024-11-18

2024-11-05

05 Nov 19:39
1fe2489
Compare
Choose a tag to compare

2024-11-01

01 Nov 18:01
1fe2489
Compare
Choose a tag to compare

What's Changed

Full Changelog: v2024-09-04b...v2024-11-01

2024-09-04

04 Sep 21:40
7468f3f
Compare
Choose a tag to compare

2024-08-09

09 Aug 14:23
Compare
Choose a tag to compare

In case of any confusion, this release includes MA and EMAPA.

What's Changed

Full Changelog: v2024-08-02...v2024-08-09