Code

Implement mono graph#448

Code

Merged

ielis merged 9 commits intodevelopmonarch-initiative/phenol:developfrom mono-graphmonarch-initiative/phenol:mono-graphCopy head branch name to clipboardNov 20, 2023

+1,582-611

Commits

Commits on Oct 31, 2023

• Setup benchmark stubs.

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  323f98b

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• Refactor CsrOntologyGraph to CsrPolyOntologyGraph.

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  a8de4e1

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Commits on Nov 1, 2023

• Implement CsrMonoOntologyGraph. Fix bug in CsrPolyOntologyGraph that supports to iterate over the iterable only once. Improve OntologyGraph testing.

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  312ad5a

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• Expose mono CSR builder through OntologyGraphBuilders.

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  094eaff

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• Setup benchmark for poly vs. mono. Use mono by default in MinimalOntologyLoader and OntologyLoader.

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  6a470a0

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• Use hash map instead of binary search. Extend benchmarks.

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  474ffa7

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• Add bench results

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  c537d92

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Commits on Nov 3, 2023

• Set max line length to 120.

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  4c9538b

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• Improve documentation and logging.

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