Retrieving module information of input and output and EDAM ontology from bio.tools #3422
Annotations
1 error and 1 warning
Run pre-commit
Process completed with exit code 1.
|
Upload log file artifact
No files were found with the provided path: create-test-lint-wf/artifact_files.tar. No artifacts will be uploaded.
|
Set up job
2s
2s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
go to working directory
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Check out source-code repository
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Set up Python 3.12
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Install python dependencies
24s
24s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Install Nextflow
6s
6s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Create template skip igenomes
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
create a pipeline from the template igenomes
8s
8s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
run the pipeline
1m 11s
1m 11s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
remove results folder
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
nf-core pipelines sync
4s
4s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Run pre-commit
28s
28s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
remove TODO
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
uncomment include config
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
replace zenodo.XXXXXX
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
add empty ro-crate file
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
nf-core pipelines lint
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
run pre-commit
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
nf-core pipelines bump-version
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
nf-core pipelines lint in release mode
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Tar files
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Upload log file artifact
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Cleanup work directory
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Post Install Nextflow
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Post Set up Python 3.12
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Post Check out source-code repository
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Complete job
0s
0s
Error:
This step has been truncated due to its large size. Download the full logs from the menu
once the workflow run has completed.
Loading