Code

dev -> main for 3.1.0#3336

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mashehu merged 35 commits intomainnf-core/tools:mainfrom devnf-core/tools:devCopy head branch name to clipboardDec 12, 2024

+44-8

Commits

Commits on Dec 10, 2024

• set default_branch to master for now

  mashehu

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  e9cde59

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• update changelog

  mashehu

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  7110fff

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• Merge branch 'dev' into set-default-branch-to-master

  mashehu

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  47054ad

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• Merge pull request #3335 from mashehu/set-default-branch-to-master

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  mashehu

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  a791707

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• set git defaultBranch to master in sync action

  mashehu

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  de00162

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• update changelog

  mashehu

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  60ae1af

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• use nextflow.config to set defaultBranch

  mashehu

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  5ee2d52

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• Merge pull request #3337 from mashehu/fix-init-branch-in-sync-action

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  mashehu

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  0e7c870

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• fix path for nextflow.config grep

  mashehu

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  666fc9f

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• Merge branch 'dev' of github.com:nf-core/tools into fix-sync-grep

  mashehu

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  7a69b8c

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• change working dir when setting defaultBranch

  mashehu

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  15b044d

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• fix Changelog

  mashehu

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  1a22106

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• Be more verbose in approval check action

  mashehu

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  0b7fe50

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• fix if clause

  mashehu

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  f7ced6b

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• update changelog

  mashehu

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  1748613

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• add verbose mode to sync action

  mashehu

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  fa4e074

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• update changelog

  mashehu

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Commits on Dec 11, 2024

• Apply suggestions from code review

  mirpedrol

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  bb3a252

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• add input debug for workflow_dispatch sync action

  mirpedrol

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  379bad0

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• Merge pull request #3339 from mashehu/add-verbose-mode-to-sync

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  mirpedrol

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  06db03f

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• go back to original directory after configuring git defaultBranch

  mirpedrol

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  6148983

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• Merge pull request #3342 from mirpedrol/sync-default-branch

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  mirpedrol

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• add more debugging on sync GHA

  mirpedrol

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  df5b323

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• Merge pull request #3345 from mirpedrol/sync-default-branch

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  mirpedrol

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  e8b6a9f

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• echo message to sync GHA

  mirpedrol

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  1de1034

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• try exiting pipeline directory before saving defaultBranch

  mirpedrol

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  3858e38

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• cleanup debugging echo

  mirpedrol

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  380be6c

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• use same ref in checkout as triggered the workflow

  mashehu

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  be38c15

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Commits on Dec 12, 2024

• Merge pull request #3347 from mashehu/specify-ref-in-sync-yml

  mashehu

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  1af4c61

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• don't set up loggin level to error

  mirpedrol

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  e92f327

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• Merge pull request #3349 from mirpedrol/sync-debugging

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  mirpedrol

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  d56b528

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• Revert "don't set up loggin level to error [no changelog]"

  mashehu

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  8f00659

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• Merge pull request #3350 from nf-core/revert-3349-sync-debugging

  mashehu

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  f77737d

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• Update nf_core/pipeline-template/.github/workflows/awsfulltest.yml

  mirpedrol

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  c2a9dee

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• Merge pull request #3338 from mashehu/more-verbose-awsfulltest-checks

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  mirpedrol

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